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9ab6971Claude	1	# GLUECRON BUILD BIBLE
	2
	3	This file is the single source of truth for the GlueCron build.
	4
	5	Every Claude agent MUST read this file in full before touching code. No exceptions.
	6
	7	GlueCron is a GitHub replacement — AI-native code intelligence, green ecosystem enforcement, git hosting, automated CI. It is production infrastructure for multiple downstream platforms. Production cannot stop.
	8
	9	---
	10
	11	## 1. AGENT POLICY (READ FIRST, FOLLOW ALWAYS)
	12
	13	### 1.1 Required reads at session start
	14	1. `BUILD_BIBLE.md` (this file) — complete
	15	2. `CLAUDE.md` — stack + architecture
	16	3. `README.md` — user-facing overview
	17	4. Most recent commit on the current branch (`git log -1 --stat`)
	18
	19	### 1.2 Do-not-undo rule
	20	- Anything listed in §4 LOCKED BLOCKS is shipped and must not be deleted, renamed, or semantically altered without the owner's explicit written permission in the current session.
	21	- "Refactor" is not permission. "Clean up" is not permission. "Simplify" is not permission.
	22	- If a locked file seems wrong, open an issue in the plan and keep going on a new block.
	23
	24	### 1.3 Continuous-build rule
	25	- The owner runs many parallel projects. Do not stop work to ask for clarification that can be inferred from this file.
	26	- Default behaviour when a block is partially complete: finish it, run tests, commit, push, start the next block.
	27	- Only stop for genuinely blocking decisions: destructive operations, architectural reversals, requests outside this plan, or repeated test failures you can't diagnose.
	28	- Never stop because "the session might run out." Commit what works and keep building.
	29
	30	### 1.4 Branch + commit rules
	31	- Development branch: whatever the current session was told (check session opening message). Fall back to `main` if none given.
	32	- One commit per completed block. Message format: `feat(BLOCK-ID): <summary>`.
	33	- Push after every commit with `git push -u origin <branch>`.
	34	- Never force-push. Never `--no-verify`. Never amend published commits.
	35
	36	### 1.5 Quality bars (non-negotiable)
	37	- `bun test` must pass before every commit.
	38	- New features ship with tests in `src/__tests__/`.
	39	- New routes use `softAuth` or `requireAuth` middleware.
	40	- New DB tables have a corresponding migration in `drizzle/`.
	41	- AI features use `isAiAvailable()` guards and degrade gracefully without `ANTHROPIC_API_KEY`.
	42	- Every user-facing failure mode has a fallback — no 500s reach the UI.
	43
	44	### 1.6 Green-ecosystem-by-default
	45	- Every new repo auto-configures: gates on, branch protection on, labels seeded, CODEOWNERS synced, welcome issue posted.
	46	- Users can opt out per feature but defaults are maximum-green.
	47	- Nothing broken ever reaches production, the website, or the customer.
	48
15e65d2Claude	49	### 1.7 Parallelism rule (added per owner request)
	50	- Default to spawning sub-agents whenever work can be parallelised. Owner-cost of an idle main thread is high; owner-cost of an extra agent is near-zero.
	51	- Independent files = parallel agents. Schema-only edits, new route files, doc updates, test additions, codebase research — all of these run in parallel by default unless they collide.
	52	- Coordinate file ownership: one agent per file. Never let two agents edit the same file. Mounting + middleware integration stay on the main thread to avoid merge conflicts.
	53	- When launching multiple agents, send them in a single message with multiple Agent tool calls so they actually run concurrently.
	54	- The main thread is responsible for: reviewing each agent's output before integrating, running the test suite, and committing. Trust-but-verify — read the changes, don't just rely on the agent's summary.
	55
9ab6971Claude	56	---
	57
	58	## 2. GITHUB PARITY SCORECARD
	59
	60	Legend: ✅ shipped · 🟡 partial · ❌ not built
	61
	62	### 2.1 Repository hosting
	63	\| Feature \| Status \| Notes \|
	64	\|---\|---\|---\|
	65	\| Git Smart HTTP (clone / push / fetch) \| ✅ \| `src/routes/git.ts`, `src/git/protocol.ts` \|
	66	\| SSH keys \| ✅ \| `ssh_keys` table, `src/routes/settings.tsx` \|
	67	\| Public / private visibility \| ✅ \| `repositories.isPrivate` \|
	68	\| Forking \| ✅ \| `src/routes/fork.ts` \|
	69	\| Stars \| ✅ \| `stars` table, `/:owner/:repo/star` \|
	70	\| Topics \| ✅ \| `repo_topics` table \|
	71	\| Archive / disable repo \| ❌ \| schema has flags; no UI \|
	72	\| Repository transfer \| ❌ \| — \|
	73	\| Template repositories \| ❌ \| — \|
	74	\| Repository mirroring \| ❌ \| — \|
	75
	76	### 2.2 Code browsing
	77	\| Feature \| Status \| Notes \|
	78	\|---\|---\|---\|
	79	\| File tree browser \| ✅ \| `src/routes/web.tsx` \|
	80	\| Syntax highlighting \| ✅ \| 40+ languages, `src/lib/highlight.ts` \|
	81	\| Commit history \| ✅ \| \|
	82	\| Diffs \| ✅ \| \|
	83	\| Blame \| ✅ \| \|
	84	\| Raw file download \| ✅ \| \|
	85	\| Branch switcher \| ✅ \| \|
	86	\| Tag listing \| ✅ \| new this build \|
	87	\| Code search (ILIKE) \| ✅ \| per-repo + global \|
	88	\| Semantic / embedding search \| ❌ \| pgvector not wired \|
	89	\| Symbol / xref navigation \| ❌ \| — \|
	90
	91	### 2.3 Collaboration
	92	\| Feature \| Status \| Notes \|
	93	\|---\|---\|---\|
	94	\| Issues (CRUD / comments / labels / close) \| ✅ \| \|
	95	\| Milestones \| ✅ \| `src/routes/insights.tsx` \|
	96	\| Pull requests (CRUD / review / merge) \| ✅ \| \|
	97	\| PR inline comments \| ✅ \| file+line anchored \|
6fc53bdClaude	98	\| Draft PRs \| ✅ \| create as draft, ready-for-review toggle, dedicated tab, merge blocked until ready \|
	99	\| Reactions (emoji) \| ✅ \| 8 reactions, toggle via `POST /api/reactions/:t/:id/:emoji/toggle` on issues + PRs + comments \|
9ab6971Claude	100	\| Mentions + notifications \| ✅ \| `src/routes/notifications.tsx` \|
	101	\| Code owners \| ✅ \| `src/lib/codeowners.ts` \|
24cf2caClaude	102	\| Issue templates \| ✅ \| `.github/ISSUE_TEMPLATE.md` auto-prefills new issues; frontmatter stripped; `src/lib/templates.ts` \|
	103	\| PR templates \| ✅ \| `.github/PULL_REQUEST_TEMPLATE.md` auto-prefills new PRs; `src/lib/templates.ts` \|
	104	\| Saved replies \| ✅ \| per-user canned comments, unique-shortcut, `/settings/replies`, `/api/user/replies` \|
9ab6971Claude	105	\| Discussions / forums \| ❌ \| \|
	106	\| Wikis \| ❌ \| \|
	107	\| Projects / kanban \| ❌ \| \|
	108
	109	### 2.4 Automation + AI
	110	\| Feature \| Status \| Notes \|
	111	\|---\|---\|---\|
ad6d4adClaude	112	\| Webhooks (outbound, HMAC signed) \| ✅ \| `src/routes/webhooks.tsx` \|
	113	\| GateTest inbound callback \| ✅ \| `POST /api/hooks/gatetest`, bearer or HMAC \|
	114	\| Backup PAT-auth gate ingest \| ✅ \| `POST /api/v1/gate-runs` \|
9ab6971Claude	115	\| Gate runs (test / secret / AI review) \| ✅ \| `gate_runs` table, `src/routes/gates.tsx` \|
	116	\| Branch protection \| ✅ \| `branch_protection` table + UI \|
	117	\| Auto-repair engine \| ✅ \| `src/lib/auto-repair.ts` \|
	118	\| Secret scanner \| ✅ \| 15 patterns, `src/lib/security-scan.ts` \|
	119	\| AI security review \| ✅ \| Sonnet 4, `src/lib/security-scan.ts` \|
	120	\| AI commit messages \| ✅ \| `src/lib/ai-generators.ts` \|
	121	\| AI PR summaries \| ✅ \| \|
	122	\| AI changelogs \| ✅ \| auto on release create \|
	123	\| AI code review \| ✅ \| `src/lib/ai-review.ts` \|
	124	\| AI merge conflict resolver \| ✅ \| `src/lib/merge-resolver.ts` \|
	125	\| AI chat (global + repo) \| ✅ \| `src/routes/ask.tsx` \|
5e888b7Claude	126	\| GitHub Actions equivalent (workflow runner) \| ✅ \| `src/lib/workflow-parser.ts`, `src/lib/workflow-runner.ts`, `src/routes/workflows.tsx`; `.gluecron/workflows/*.yml` auto-discovered on push; Bun subprocess executor, per-step timeouts, size-capped logs \|
9ab6971Claude	127	\| Dependabot equivalent (AI dep bumper) \| ❌ \| \|
	128	\| Code scanning UI \| 🟡 \| data exists, no dedicated UI page \|
	129	\| Copilot code completion \| ❌ \| \|
	130
	131	### 2.5 Platform
	132	\| Feature \| Status \| Notes \|
	133	\|---\|---\|---\|
	134	\| Dashboard \| ✅ \| `src/routes/dashboard.tsx` \|
	135	\| Explore / discover \| ✅ \| \|
	136	\| Global search \| ✅ \| repos / users / issues / PRs \|
	137	\| Insights (graph, contributors, green rate) \| ✅ \| `src/routes/insights.tsx` \|
	138	\| Releases + tags \| ✅ \| AI changelog \|
	139	\| Personal access tokens \| ✅ \| SHA-256 hashed \|
058d752Claude	140	\| OAuth app provider \| ✅ \| `src/routes/oauth.tsx`, `src/routes/developer-apps.tsx`, `src/lib/oauth.ts`; `oauth_apps` + `oauth_authorizations` + `oauth_access_tokens` tables \|
9ab6971Claude	141	\| GitHub Apps equivalent \| ❌ \| \|
	142	\| GraphQL API \| ❌ \| REST only \|
058d752Claude	143	\| Organizations + teams \| ✅ \| B1+B2+B3 shipped: `src/routes/orgs.tsx`, `src/lib/orgs.ts`; org-owned repos (`repositories.orgId`); team-based CODEOWNERS (`@org/team` resolution) \|
9ab6971Claude	144	\| Enterprise SAML / SSO \| ❌ \| \|
058d752Claude	145	\| 2FA / TOTP \| ✅ \| `src/routes/settings-2fa.tsx`, `src/lib/totp.ts`; `user_totp` + `user_recovery_codes` tables \|
	146	\| Passkeys / WebAuthn \| ✅ \| `src/routes/passkeys.tsx`, `src/lib/webauthn.ts`; `user_passkeys` + `webauthn_challenges` tables \|
25a91a6Claude	147	\| Packages registry (npm / docker / etc) \| ✅ \| `src/lib/packages.ts`, `src/routes/packages-api.ts`, `src/routes/packages.tsx`; npm protocol (packument, tarball, publish, yank); PAT (`glc_`) auth via Authorization header; container registry deferred \|
	148	\| Pages / static hosting \| ✅ \| `src/lib/pages.ts`, `src/routes/pages.tsx`; serves blobs from bare git at latest `gh-pages` commit; per-repo settings (source branch/dir, custom domain); short-cache headers \|
9ab6971Claude	149	\| Gists \| ❌ \| \|
	150	\| Sponsors \| ❌ \| \|
	151	\| Marketplace \| ❌ \| \|
25a91a6Claude	152	\| Environments / deployment tracking \| ✅ \| `src/routes/deployments.tsx` — grouped by env, success-rate rollup, per-deploy detail. Protected environments (`src/routes/environments.tsx`, `src/lib/environments.ts`) with reviewer-gated approval, branch-glob restrictions, approve/reject decisions recorded in `deployment_approvals` \|
9ab6971Claude	153	\| Merge queues \| ❌ \| \|
	154	\| Required checks matrix \| 🟡 \| branch_protection has single flag, no matrix \|
	155
	156	### 2.6 Observability + safety
	157	\| Feature \| Status \| Notes \|
	158	\|---\|---\|---\|
	159	\| Rate limiting \| ✅ \| `src/middleware/rate-limit.ts` \|
	160	\| Request-ID tracing \| ✅ \| `src/middleware/request-context.ts` \|
	161	\| Health / readiness / metrics \| ✅ \| `/healthz` `/readyz` `/metrics` \|
	162	\| Audit log (table) \| ✅ \| `audit_log` table \|
6fc53bdClaude	163	\| Audit log UI \| ✅ \| `/settings/audit` (personal) + `/:owner/:repo/settings/audit` (per-repo, owner-only) \|
9ab6971Claude	164	\| Traffic analytics per repo \| ❌ \| \|
24cf2caClaude	165	\| Email notifications \| ✅ \| opt-in per kind (mention/assign/gate-fail) via `/settings`; provider-pluggable `src/lib/email.ts` (log default, resend in prod) \|
9ab6971Claude	166	\| Email digest \| ❌ \| \|
	167	\| Mobile PWA \| 🟡 \| responsive CSS, no manifest \|
	168	\| Native mobile apps \| ❌ \| \|
6fc53bdClaude	169	\| Dark mode \| ✅ \| default \|
	170	\| Light-mode toggle \| ✅ \| `/theme/toggle` + `theme` cookie, pre-paint script avoids FOUC, nav sun/moon icon \|
9ab6971Claude	171	\| Keyboard shortcuts \| ✅ \| `/shortcuts` page \|
	172	\| Command palette \| 🟡 \| Cmd+K → Ask AI, no generic palette \|
	173
	174	---
	175
	176	## 3. BUILD PLAN (BLOCKS)
	177
	178	Each block is a self-contained unit. Order matters for dependencies. Each block ends with tests + commit + push.
	179
	180	### BLOCK A — Hardening the current surface
	181	Polish what's shipped before adding more. Priority: do this first if parity gaps are minor.
6fc53bdClaude	182	- A1 — Dark/light theme toggle (cookie, CSS variable swap) ✅
	183	- A2 — Audit log UI page (`/settings/audit` + `/:owner/:repo/settings/audit`) ✅
	184	- A3 — Reactions UI on issues / PRs / comments (data exists) ✅
	185	- A4 — Draft PR toggle + filter ✅
24cf2caClaude	186	- A5 — Issue + PR templates (`.github/*_TEMPLATE.md` auto-prefill) ✅
	187	- A6 — Saved replies per user ✅
	188	- A7 — Environments + deployment history UI (`deployments` table) ✅
	189	- A8 — Email notifications (opt-in, provider-pluggable) ✅
	190
	191	BLOCK A COMPLETE. Next: BLOCK B (Identity + orgs).
9ab6971Claude	192
	193	### BLOCK B — Identity + orgs
058d752Claude	194	- B1 — Organizations (schema: `organizations`, `org_members`, `teams`, `team_members`) → ✅ shipped (`6563f0a`)
6563f0aClaude	195	- Helpers in `src/lib/orgs.ts`: slug validation, role rank, reserved-slug set, loaders
	196	- Routes in `src/routes/orgs.tsx`: list / create / profile / people / teams / team detail
	197	- Role-based guards: admin adds members, owner grants owner, last-owner demote/remove blocked
	198	- All sensitive actions `audit()`'d (org.create, member.add/role/remove, team.create, team.member.add/remove)
058d752Claude	199	- B2 — Repos owned by orgs (nullable `repositories.orgId`) → ✅ shipped (`7437605`)
	200	- B3 — Team-based CODEOWNERS (`@org/team` resolution) → ✅ shipped (`40d3e3f`)
	201	- B4 — 2FA / TOTP (enroll, recovery codes) → ✅ shipped (`7298a17`)
	202	- B5 — WebAuthn / passkeys → ✅ shipped (`2df1f8c`)
	203	- B6 — OAuth 2.0 provider (third-party apps can request access) → ✅ shipped (pending final commit)
9ab6971Claude	204
	205	### BLOCK C — Runtime + hosting
5e888b7Claude	206	- C1 — Actions-equivalent workflow runner → ✅ shipped (`eafe8c6`)
	207	- Workflow YAML parser (`src/lib/workflow-parser.ts`) — hand-rolled subset
	208	- Background worker (`src/lib/workflow-runner.ts`) — Bun.spawn, size-capped logs, SIGTERM→SIGKILL timeouts
	209	- Auto-discovery from `.gluecron/workflows/*.yml` on default-branch push
	210	- UI at `/:owner/:repo/actions` with manual trigger + cancel
25a91a6Claude	211	- C2 — Package registry (npm protocol) → ✅ shipped
	212	- Packument + tarball + publish + yank via `PUT /npm/<name>` + `GET /npm/<name>`
	213	- PAT (`glc_`) bearer auth for CLI clients; add `//host/npm/:_authToken=<PAT>` to .npmrc
	214	- Container registry deferred (schema ready for it)
	215	- C3 — Pages / static hosting → ✅ shipped
	216	- Serves `/:owner/:repo/pages/*` from the latest successful `pages_deployments` row
	217	- Auto-records on push to the repo's configured source branch (default `gh-pages`)
	218	- Settings UI at `/:owner/:repo/settings/pages` + manual redeploy
	219	- C4 — Environments with protected approvals → ✅ shipped
	220	- Per-repo `environments` with reviewer list + branch-glob allowlist
	221	- Auto-deploy on main is gated by `requiresApprovalFor()`; pending rows show status `pending_approval`
	222	- Approve/reject at `POST /:owner/:repo/deployments/:id/approve\|reject`
9ab6971Claude	223
	224	### BLOCK D — AI-native differentiation
	225	This is where GlueCron beats GitHub outright. Priority: ship these loud.
	226	- D1 — Semantic code search (pgvector + Claude embeddings)
	227	- D2 — AI dependency updater (reads lockfile, opens PRs, verifies green)
	228	- D3 — AI PR triage agent (auto-assigns reviewers, labels, milestones)
	229	- D4 — AI incident responder (on deploy failure, opens issue with root cause)
	230	- D5 — AI code reviewer that blocks merges (enforced via branch protection "AI approval required")
	231	- D6 — AI "explain this codebase" on repo landing (auto-generated, cached)
	232	- D7 — AI changelog for every commit range (`/:owner/:repo/ai/changelog?from=...&to=...`)
	233	- D8 — AI-generated test suite (reads public API, generates failing tests)
	234	- D9 — Copilot-style completion endpoint for IDE plugins
	235
	236	### BLOCK E — Collaboration parity
	237	- E1 — Projects / kanban boards (`projects`, `project_items`, `project_fields`)
	238	- E2 — Discussions (forum threads per repo)
	239	- E3 — Wikis (git-backed, separate bare repo per repo)
	240	- E4 — Gists (user-owned tiny repos)
	241	- E5 — Merge queues (serialised merge with re-test)
	242	- E6 — Required status checks matrix (multiple named checks per branch protection rule)
	243	- E7 — Protected tags
	244
	245	### BLOCK F — Observability + admin
	246	- F1 — Traffic analytics per repo (views, clones, unique visitors)
	247	- F2 — Org-wide insights (green rate across all repos)
	248	- F3 — Admin / superuser panel (user moderation, repo audit)
	249	- F4 — Billing + quotas (storage, AI tokens, bandwidth)
	250
	251	### BLOCK G — Mobile + client
	252	- G1 — PWA manifest + service worker
	253	- G2 — GraphQL API mirror of REST
	254	- G3 — Official CLI (`gluecron` binary in Bun)
	255	- G4 — VS Code extension
	256
	257	### BLOCK H — Marketplace
	258	- H1 — App marketplace (install third-party apps against a repo)
	259	- H2 — GitHub Apps equivalent (bot identities with scoped permissions)
	260
	261	---
	262
	263	## 4. LOCKED BLOCKS (DO NOT UNDO)
	264
	265	Everything below is committed, tested, and load-bearing. Do not delete, rename, or semantically change without owner permission.
	266
	267	### 4.1 Infrastructure (locked)
	268	- `src/app.tsx` — route composition, middleware order, error handlers
	269	- `src/index.ts` — Bun server entry
	270	- `src/lib/config.ts` — env getters (late-binding)
	271	- `src/db/schema.ts` — 27 tables. New tables only via new migration.
	272	- `src/db/index.ts` — lazy proxy DB connection
	273	- `src/db/migrate.ts` — migration runner
	274	- `drizzle/0000_initial.sql`, `drizzle/0001_green_ecosystem.sql` — migrations
058d752Claude	275	- `drizzle/0004_org_owned_repos.sql` (Block B2) — migration, never edited in place
	276	- `drizzle/0005_totp_2fa.sql` (Block B4) — migration, never edited in place
	277	- `drizzle/0006_webauthn_passkeys.sql` (Block B5) — migration, never edited in place
	278	- `drizzle/0007_oauth_provider.sql` (Block B6) — migration, never edited in place
5e888b7Claude	279	- `drizzle/0008_workflows.sql` (Block C1) — migration, never edited in place
25a91a6Claude	280	- `drizzle/0009_packages.sql` (Block C2) — migration, never edited in place
	281	- `drizzle/0010_pages.sql` (Block C3) — migration, never edited in place
	282	- `drizzle/0011_environments.sql` (Block C4) — migration, never edited in place
9ab6971Claude	283
	284	### 4.2 Git layer (locked)
	285	- `src/git/repository.ts` — tree / blob / commits / diff / branches / blame / search / raw / tags / commitsBetween
	286	- `src/git/protocol.ts` — Smart HTTP pkt-line
	287	- `src/hooks/post-receive.ts` — CODEOWNERS sync, gates, auto-deploy, webhook fan-out
	288
	289	### 4.3 Auth + security (locked)
	290	- `src/lib/auth.ts` — bcrypt, session tokens
25a91a6Claude	291	- `src/middleware/auth.ts` — softAuth + requireAuth. Accepts three auth inputs: session cookie (web), OAuth access token (`glct_` prefix, Block B6), and personal access token (`glc_` prefix, Block C2). Invalid bearer → 401 JSON. Cookie flow → /login redirect.
9ab6971Claude	292	- `src/middleware/rate-limit.ts` — fixed-window limiter
	293	- `src/middleware/request-context.ts` — request-ID
	294	- `src/lib/security-scan.ts` — `SECRET_PATTERNS` (exported) + `scanForSecrets` + `aiSecurityScan`
058d752Claude	295	- `src/lib/codeowners.ts` — parser + `ownersForPath` (last-match-wins); team expansion helpers for `@org/team` (Block B3)
	296	- `src/lib/totp.ts` (Block B4) — TOTP enroll / verify / recovery codes
	297	- `src/lib/webauthn.ts` (Block B5) — WebAuthn registration + assertion helpers
	298	- `src/lib/oauth.ts` (Block B6) — OAuth 2.0 provider: authorization code grant, token issuance, scope enforcement
5e888b7Claude	299	- `src/lib/workflow-parser.ts` (Block C1) — YAML subset parser for `.gluecron/workflows/*.yml`. Exports `parseWorkflow(src)` returning `{ ok, workflow \| error }`. Never throws.
	300	- `src/lib/workflow-runner.ts` (Block C1) — shell executor. Exports `executeRun`, `drainOneRun`, `enqueueRun`, `startWorker`. Clones repo to tmpdir, runs each job via `Bun.spawn(["bash","-c",step.run])` with SIGTERM→SIGKILL timeouts, size-capped stdout/stderr, cleans up in `finally`.
25a91a6Claude	301	- `src/lib/packages.ts` (Block C2) — npm protocol helpers: `parsePackageName`, `computeShasum` (sha1), `computeIntegrity` (sha512 base64), `buildPackument`, `resolveRepoFromPackageJson`, `parseRepoUrl`, `tarballFilename`. Pure functions.
	302	- `src/lib/pages.ts` (Block C3) — `onPagesPush` (never throws), `resolvePagesPath` (probe list including pretty URLs + traversal strip), `contentTypeFor` (MIME).
	303	- `src/lib/environments.ts` (Block C4) — `matchGlob`, `listEnvironments`, `getOrCreateEnvironment`, `getEnvironmentByName`, `isReviewer`, `reviewerIdsOf`, `allowedBranchesOf`, `computeApprovalState`, `reduceApprovalState`, `recordApproval`, `requiresApprovalFor`. Empty reviewers list → repo owner approves. Any rejection hard-stops.
9ab6971Claude	304
	305	### 4.4 AI layer (locked)
	306	- `src/lib/ai-client.ts` — Anthropic client + model constants
	307	- `src/lib/ai-generators.ts` — commit / PR / changelog / issue-triage
	308	- `src/lib/ai-chat.ts` — conversational chat
	309	- `src/lib/ai-review.ts` — PR code review
	310	- `src/lib/auto-repair.ts` — worktree-backed repair commits
	311	- `src/lib/merge-resolver.ts` — AI merge conflict resolution
	312
	313	### 4.5 Platform (locked)
24cf2caClaude	314	- `src/lib/notify.ts` — notification creation + audit log (swallow-failures pattern). Also fans out email to opted-in recipients for `mention\|review_requested\|assigned\|gate_failed`. Exports `__internal` for tests.
	315	- `src/lib/email.ts` — provider-pluggable email sender (`log`\|`resend`). `sendEmail()` never throws. `absoluteUrl()` joins paths against `APP_BASE_URL`.
	316	- `src/lib/templates.ts` — `loadIssueTemplate` / `loadPrTemplate`. Checks standard paths (`.github/`, `.gluecron/`, root, `docs/`) on the default branch, strips YAML frontmatter, 16KB cap, returns null on any failure.
9ab6971Claude	317	- `src/lib/unread.ts` — unread count helper (never throws)
	318	- `src/lib/repo-bootstrap.ts` — green defaults on repo creation
	319	- `src/lib/gate.ts` — gate orchestration + persistence
	320	- `src/lib/cache.ts` — LRU cache, git-cache invalidation
6fc53bdClaude	321	- `src/lib/reactions.ts` — `summariseReactions`, `toggleReaction`, `ALLOWED_EMOJIS`, `EMOJI_GLYPH`, `isAllowedEmoji`, `isAllowedTarget`
9ab6971Claude	322
	323	### 4.6 Routes (locked endpoints — behaviour must be preserved)
	324	- `src/routes/git.ts` — Smart HTTP (clone/push)
	325	- `src/routes/api.ts` — REST (`POST /api/repos`, `GET /api/users/:u/repos`, `GET /api/repos/:o/:n`, `POST /api/setup`)
ad6d4adClaude	326	- `src/routes/hooks.ts` — `POST /api/hooks/gatetest` (bearer/HMAC), `GET /api/hooks/ping`, `POST /api/v1/gate-runs` (PAT backup), `GET /api/v1/gate-runs`. See `GATETEST_HOOK.md`.
6fc53bdClaude	327	- `src/routes/theme.ts` — `GET /theme/toggle`, `GET /theme/set?mode=`. Writes `theme` cookie (`dark`\|`light`, 1-year). Layout reads via pre-paint inline script.
	328	- `src/routes/audit.tsx` — `GET /settings/audit` (personal) + `GET /:owner/:repo/settings/audit` (owner-only).
24cf2caClaude	329	- `src/routes/saved-replies.tsx` — `GET/POST /settings/replies`, `POST /settings/replies/:id`, `POST /settings/replies/:id/delete`, `GET /api/user/replies`. Unique constraint `saved_replies_user_shortcut`.
	330	- `src/routes/deployments.tsx` — `GET /:owner/:repo/deployments` (grouped by env, success-rate rollup), `GET /:owner/:repo/deployments/:id` (detail).
6fc53bdClaude	331	- `src/routes/reactions.ts` — `POST /api/reactions/:targetType/:targetId/:emoji/toggle` (authed, form- or fetch-compatible), `GET /api/reactions/:targetType/:targetId`. Targets: `issue\|pr\|issue_comment\|pr_comment`. Emojis: 8 canonical.
9ab6971Claude	332	- `src/routes/auth.tsx` — register / login / logout
	333	- `src/routes/web.tsx` — home / new / browse / blob / commits / raw / blame / star / search / profile
	334	- `src/routes/issues.tsx` — issue CRUD + comments + labels + lock
	335	- `src/routes/pulls.tsx` — PR CRUD + review + merge + close
	336	- `src/routes/editor.tsx` — web file editor
	337	- `src/routes/compare.tsx` — base...head diff
24cf2caClaude	338	- `src/routes/settings.tsx` — profile + password + email notification preferences (`POST /settings/notifications`)
9ab6971Claude	339	- `src/routes/repo-settings.tsx` — repo settings + delete
	340	- `src/routes/webhooks.tsx` — webhook CRUD + test + `fireWebhooks`
	341	- `src/routes/fork.ts` — fork
	342	- `src/routes/explore.tsx` — discover
	343	- `src/routes/tokens.tsx` — personal access tokens
	344	- `src/routes/contributors.tsx` — contributor list
	345	- `src/routes/notifications.tsx` — inbox + unread API
	346	- `src/routes/dashboard.tsx` — authed home (`renderDashboard` exported)
	347	- `src/routes/ask.tsx` — global + repo AI chat + explain
	348	- `src/routes/releases.tsx` — tags + AI changelog
	349	- `src/routes/gates.tsx` — history + settings + branch protection UI
	350	- `src/routes/insights.tsx` — insights + milestones
	351	- `src/routes/search.tsx` — global search + `/shortcuts`
	352	- `src/routes/health.ts` — `/healthz` `/readyz` `/metrics`
6563f0aClaude	353	- `src/routes/orgs.tsx` — `/orgs` list, `/orgs/new` create, `/orgs/:slug` profile, `/orgs/:slug/people` + add/role/remove, `/orgs/:slug/teams` + create, `/orgs/:slug/teams/:teamSlug` + member add/remove. All require auth. Role guards via `orgRoleAtLeast`; last-owner cannot be demoted or removed; every write path `audit()`'d.
058d752Claude	354	- `src/lib/orgs.ts` (Block B1) — `isValidSlug` (rejects reserved + too-short/long + consecutive/leading/trailing hyphens), `normalizeSlug`, `orgRoleAtLeast` (owner>admin>member), `isValidOrgRole`, `isValidTeamRole`, `loadOrgForUser`, `listOrgsForUser`, `listOrgMembers`, `listTeamsForOrg`, `listTeamMembers`, `__test` export for unit tests.
	355	- `src/routes/settings-2fa.tsx` (Block B4) — TOTP enroll / verify / disable + recovery codes UI. All require auth.
	356	- `src/routes/passkeys.tsx` (Block B5) — WebAuthn passkey registration / assertion / management. All require auth.
	357	- `src/routes/oauth.tsx` (Block B6) — OAuth 2.0 authorize + token + userinfo endpoints.
	358	- `src/routes/developer-apps.tsx` (Block B6) — developer-facing OAuth app CRUD (`/settings/developer/apps`), client secret rotation, audit-logged.
5e888b7Claude	359	- `src/routes/workflows.tsx` (Block C1) — Actions UI. `GET /:owner/:repo/actions`, `GET /:owner/:repo/actions/runs/:runId`, `POST /:owner/:repo/actions/:workflowId/run` (auth+owner), `POST /:owner/:repo/actions/runs/:runId/cancel` (auth+owner). Manual runs are `event=manual`, ref=default branch.
25a91a6Claude	360	- `src/routes/packages-api.ts` (Block C2) — npm protocol: `GET/PUT/DELETE /npm/*` (packument, tarball, publish, yank); JSON helpers at `/api/packages/:owner/:repo/...`. PAT (`glc_`) bearer auth.
	361	- `src/routes/packages.tsx` (Block C2) — UI: `/:owner/:repo/packages` list + `/:owner/:repo/packages/:pkgName` detail.
	362	- `src/routes/pages.tsx` (Block C3) — `GET /:owner/:repo/pages/*` serves static files from latest gh-pages commit (binary via `getRawBlob`, text via `getBlob`). `GET/POST /:owner/:repo/settings/pages` settings + redeploy.
	363	- `src/routes/environments.tsx` (Block C4) — settings CRUD at `/:owner/:repo/settings/environments`; approval endpoints at `/:owner/:repo/deployments/:id/{approve,reject}`.
9ab6971Claude	364
	365	### 4.7 Views (locked contracts)
	366	- `src/views/layout.tsx` — `Layout` accepts `title`, `user`, `notificationCount`
5e888b7Claude	367	- `src/views/components.tsx` — `RepoHeader`, `RepoNav` (active: `code\|issues\|pulls\|commits\|releases\|actions\|gates\|insights\|...`), `RepoCard`, etc.
6fc53bdClaude	368	- `src/views/reactions.tsx` — `ReactionsBar` (no-JS compatible, form-per-emoji)
	369	- Nav links: logo · search · theme-toggle · Explore · Ask · Notifications · New · Profile (or Sign in / Register)
9ab6971Claude	370	- Keyboard chords: `/`, `Cmd+K`, `?`, `n`, `g d`, `g n`, `g e`, `g a`
	371
	372	### 4.8 Tests (locked)
	373	- `src/__tests__/green-ecosystem.test.ts` — secret scanner, codeowners, AI fallback, health, rate-limit headers, `/shortcuts`, `/search`
	374	- All other existing test files — do not delete without owner permission
	375
	376	### 4.9 Invariants (never break these)
	377	- `isAiAvailable()` guard returns true fallback strings when no ANTHROPIC_API_KEY. AI features degrade gracefully.
	378	- `getUnreadCount` never throws; returns 0 on any error.
	379	- Rate-limit middleware adds `X-RateLimit-Limit` + `X-RateLimit-Remaining` to every response, including 500s.
	380	- `c.header("X-Request-Id", ...)` set by request-context on every response.
	381	- Secret scanner skips binary/lock paths (`shouldSkipPath`).
	382	- `SECRET_PATTERNS` is an exported array. Its shape is `{ type, regex, severity }`.
6fc53bdClaude	383	- Theme routes live outside `/settings/*` (they must work for logged-out visitors). Cookie name: `theme`, values: `dark\|light`.
	384	- Draft PRs cannot be merged — `/pulls/:n/merge` returns a redirect with the draft error when `pr.isDraft=true`.
	385	- Reactions API accepts only `ALLOWED_EMOJIS` and `ALLOWED_TARGETS`. Toggle is idempotent per (user, target, emoji).
24cf2caClaude	386	- `sendEmail()` never throws — always resolves to `{ ok, provider, ... }`. Email failures never break notification delivery or the primary request path.
	387	- Email fan-out in `notify()` is scoped to kinds in `EMAIL_ELIGIBLE` (mention / review_requested / assigned / gate_failed). Each eligible kind maps to exactly one user preference column.
	388	- Issue + PR template loading must return `null` on any git-subprocess failure (templates are a convenience, not a requirement). Forms always render.
9ab6971Claude	389
	390	---
	391
	392	## 5. OPERATIONAL NOTES
	393
	394	### 5.1 Running locally
	395	```bash
	396	bun install
	397	bun dev # hot reload
24cf2caClaude	398	bun test # 99 tests currently pass
9ab6971Claude	399	bun run db:migrate
	400	```
	401
	402	### 5.2 Environment
	403	- `DATABASE_URL` — Neon Postgres
	404	- `ANTHROPIC_API_KEY` — unlocks AI features
	405	- `GIT_REPOS_PATH` — default `./repos`
	406	- `PORT` — default 3000
24cf2caClaude	407	- `EMAIL_PROVIDER` — `log` (default, stderr-only) or `resend`
	408	- `EMAIL_FROM` — sender address for outbound mail
	409	- `RESEND_API_KEY` — required when `EMAIL_PROVIDER=resend`
	410	- `APP_BASE_URL` — canonical URL used to build absolute links in emails
9ab6971Claude	411
	412	### 5.3 Models
	413	- `claude-sonnet-4-20250514` — code review, security, chat
	414	- `claude-haiku-4-5-20251001` — commit messages, summaries, light tasks
	415	- Swap via `MODEL_SONNET` / `MODEL_HAIKU` constants in `src/lib/ai-client.ts`
	416
	417	### 5.4 Deployment
	418	- `railway.toml` / `fly.toml` present
	419	- Crontech deploy on green push to default branch (can opt out via `autoDeployEnabled`)
	420
	421	---
	422
	423	## 6. SESSION WORKFLOW (WHAT THE NEXT AGENT DOES)
	424
	425	1. Read this file, `CLAUDE.md`, `README.md`, `git log -1 --stat`.
	426	2. Check `git status` + current branch.
	427	3. Pick the next unfinished block from §3 (lowest letter + number first, unless owner specifies).
	428	4. Create a todo list that mirrors the sub-items of that block.
	429	5. Build. Write tests. Run `bun test`.
	430	6. Commit with `feat(<BLOCK-ID>): ...`.
	431	7. Push.
	432	8. Update this file:
	433	- Move the block's row in §2 to ✅ where applicable.
	434	- Add the block's files to §4 LOCKED BLOCKS.
	435	- Commit + push again.
	436	9. Start the next block. Do not stop to ask.
	437
	438	If a block is too large for a single session, split it into a sub-plan at the top of the session, ship what you can, and document what's left at the end of this file under a `## 7. IN-FLIGHT` section.
	439
	440	---
	441
	442	## 7. IN-FLIGHT
	443
	444	(Intentionally empty. Add here if a block is partially complete at session end.)